BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H09SP1|AL425946
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1639 0.0
>3x_Contig1807
Length = 66587
Score = 1639 bits (825), Expect = 0.0
Identities = 846/854 (99%), Gaps = 1/854 (0%)
Strand = Plus / Minus
Query: 1 atttcacatgngagagtaactatattattagtgagtggatcataagcgctgtactcgttt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53990 atttcacatg-gagagtaactatattattagtgagtggatcataagcgctgtactcgttt 53932
Query: 61 ctgaatttaaaacagtttgataagaccttgtaaatctctaagacttgttgcgcactgntc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 53931 ctgaatttaaaacagtttgataagaccttgtaaatctctaagacttgttgcgcagctgtc 53872
Query: 121 ttttctgcttcactgagatcggattccaatacaacagcattttgtggacttgatgataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53871 ttttctgcttcactgagatcggattccaatacaacagcattttgtggacttgatgataag 53812
Query: 181 gctgacatggcagatgcctattcaccgctgcctttttgttcaagtggttataaaacgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53811 gctgacatggcagatgcctattcaccgctgcctttttgttcaagtggttataaaacgcat 53752
Query: 241 ctctttacactcctatttggagtaagatttgataacaattgaggctagtgaagaaatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53751 ctctttacactcctatttggagtaagatttgataacaattgaggctagtgaagaaatgaa 53692
Query: 301 tagaataaaacactacgtaattcaccatcatttgcttctcgtctgcgtttggtacttgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53691 tagaataaaacactacgtaattcaccatcatttgcttctcgtctgcgtttggtacttgtt 53632
Query: 361 gcacgtgtgtctatcattaatagtactctaactatcacagcccaaccgcatttacctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53631 gcacgtgtgtctatcattaatagtactctaactatcacagcccaaccgcatttacctaaa 53572
Query: 421 attgcctatggcactttattccatatccatgttcagaacaatatatgcataagttgaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53571 attgcctatggcactttattccatatccatgttcagaacaatatatgcataagttgaaaa 53512
Query: 481 ttttgtaactttaggaaaaagtggaaaammagtgaaaccattcgaagtactgtttctggc 540
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 53511 ttttgtaactttaggaaaaagtggaaaaaaagtgaaaccattcgaagtactgtttctggc 53452
Query: 541 tcgtaaaattcaatcgaccaactaagaaatgtcttcagggctgcacttgttcgagcaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53451 tcgtaaaattcaatcgaccaactaagaaatgtcttcagggctgcacttgttcgagcaaac 53392
Query: 601 aatcttcaattatcaaacatgatcgattggmaactttgaaacatgcaccgaaataaaaca 660
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 53391 aatcttcaattatcaaacatgatcgattggaaactttgaaacatgcaccgaaataaaaca 53332
Query: 661 tccatgcgttgatttagttgtgattccagagataattgtcgcaggcttcgagaatgaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53331 tccatgcgttgatttagttgtgattccagagataattgtcgcaggcttcgagaatgaagt 53272
Query: 721 ttacctcaaaatcggatcgccaatcagaaaatcatcatctttccatcgctatgtttcgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53271 ttacctcaaaatcggatcgccaatcagaaaatcatcatctttccatcgctatgtttcgcc 53212
Query: 781 tcctagataaaatgagaaaaaaatattccgagtagggcctcagccaccattttccttcga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53211 tcctagataaaatgagaaaaaaatattccgagtagggcctcagccaccattttccttcga 53152
Query: 841 aaggtattatcatg 854
||||||||||||||
Sbjct: 53151 aaggtattatcatg 53138
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6276
Number of Sequences: 1807
Number of extensions: 6276
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)